Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

73 of 7,765 resources matching “protein”

Showing 1–50

A DNA annotation model from the Carbon family.

Active1.1K4 days ago
Python

Blog | Hugging Face Bio | Code

Active4.5K1 week ago
Python

protein binders with RFD4-Proteina entirely on a MacBook: target

Active01 week ago
Python

Blog | Carbon-X | Carbon-X-Base | Hugging Face Bio | Code

Active3831 week ago
Python

Sequence and structure, designed together.Baker Lab × NVIDIA GenAIR Project page

Active3362 weeks ago
Python

A System-1 decision model for biomedicine, pharma and clinical

Active5933 weeks ago
Python

A domain-adapted Qwen3.5-9B for aging and longevity biology. L

Active4571 month ago
Python

protein language model that has learned the rules of protein

Active611 month ago
Python

This model card provides an overview of the intended use

Active1.1K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

protein language model that has learned the rules of protein

Active94.7K1 month ago
Python

protein language model that has learned the rules of protein

Active15K1 month ago
Python

protein language model that has learned the rules of protein

Active217.6K1 month ago
Python

protein structure prediction and design that defines a new frontier

Active277.8K1 month ago
Python

protein structure prediction and design that defines a new frontier

Active181.7K1 month ago
Python

# Geneformer Geneformer is a foundational transformer model pretrained on a

Active2.1K1 month ago
Python

See the upstream model card for full details, training data

Active2151 month ago
Python

OmniTCR is a component-aware autoregressive foundation model for learning

Active02 months ago
Python

PertMind is a biological language model built around a central

Active5032 months ago
Python

protein language model for the phosphotransferase superfamily (EC 2.7.-: protein

Active822 months ago
Python

protein variant classifier that predicts whether a mutated protein sequence

Active702 months ago
Python

protein embeddings where biological similarity maps to embedding proximity. Intended

Active483 months ago
Python

ProtSent-V2 35M plus one more contrastive pass on a

Active193 months ago
Python

protein embeddings where biological similarity maps to embedding proximity. Intended

Active223 months ago
Python

Trinity-Mini-AI-Scientist

Active133 months ago
Python

SMILES structures based on both disease pathways and protein sequence.

Active463 months ago
Python

protein–protein and peptide–MHC interaction, and more — following the…

Active993 months ago
Python

protein structure prediction and design that defines a new frontier

Active113 months ago
Python

SMILES structures based on both disease pathways and protein sequence.

Active6804 months ago
Python

650M with LoRA for predicting protein subcellular localization (10 classes).

Active184 months ago
Python

Gravity-bio-16B-A3B is a biology-focus midtrained model

Active2354 months ago
Python

Molexar-10M Base is the unconditional base model for Molexar

Active154 months ago
Python

Molexar-10M Omni is the universal multi-condition model for

Active114 months ago
Python

both molecules and proteins within a single decoder-only architecture.

Active1064 months ago
Python

promptable and aligned protein language models for protein sequence generation.

Active1.6K4 months ago
Python

KAU-BioMedLLM is a research prototype for source-grounded biomedical

Active04 months ago
Python

protein sequences, 236 million protein structures, and 539 million proteins

Active2K5 months ago
Python

This model card provides an overview of the intended use

Active05 months ago
Python

This model card provides an overview of the intended use

Active10K5 months ago
Python

This set of model weights was released with the GitHub

Active1.1K5 months ago
Python

protein language model for protein sequence generation. It is the smallest

Active2.6K5 months ago
Python

protein language model for protein sequence generation. It is the largest

Active995 months ago
Python

!Protein-ligand interaction header

Active65 months ago
Python

This set of model weights was released with the GitHub

Active6.2K5 months ago
Python

Target-Conditioned Molecular Ideation Model for Drug Discovery Research

Active05 months ago
Python

Gemma 4 E2B fine-tuned on 225K drug–target pairs

Active255 months ago
Python

- 2025-05-15: We identified a bug in the Bacformer

Active8K5 months ago
Python

- 2025-05-15: We identified a bug in the Bacformer

Active5475 months ago
Python