Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

11 of 6,584 resources

Directed message passing neural networks for property prediction of molecules and reactions with uncertainty and interpretation.

Active2.4K4 days ago
Python
NOASSERTION

Python Library for Automating Molecular Simulation: input preparation, job execution, file management, output processing and building data workflows.

Active932 weeks ago
Python
NOASSERTION

PyTorch toolkit for deep neural networks in atomistic simulations, implementing SchNet, DimeNet++, PaiNN, and GemNet for molecular dynamics and quantum chemistry (900+ stars)

Active9343 weeks ago
Python
NOASSERTION

A library for processing, analyzing and modeling spectroscopic data.

Active1793 weeks ago
Python
NOASSERTION

A package to 'build' collections of materials properties from the output of computational materials calculations.

Active684 weeks ago
Python
NOASSERTION

A molecule manipulation library.

Active2371 month ago
Python
NOASSERTION

atomate2 is a library of computational materials science workflows.

Active3291 month ago
Python
NOASSERTION

This package provides a periodic table of the elements with support for mass, density and xray/neutron scattering information.

Active1732 months ago
Python
NOASSERTION

Universal pretrained neural network potential with charge and magnetic moment awareness, trained on 1.5M+ Materials Project inorganic structures for charge-informed molecular dynamics and phase diagram prediction (Berkeley, Nature Machine Intelligence 2023 Cover)

Idle3996 months ago
Python
NOASSERTION

NIST's open-source platform for data-driven atomistic materials design, integrating DFT datasets (JARVIS-DFT), machine learning property prediction (JARVIS-ML), and a comprehensive leaderboard for benchmarking materials AI methods across the periodic table (384+ stars)

Idle3901 year ago
Python
NOASSERTION

Descriptor computation(chemistry) and (optional) storage for machine learning.

Idle2801 year ago
Python
NOASSERTION