Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

6 of 5,923 resources

Molecular dynamics in JAX

Active1.4K1 week ago
Jupyter Notebook
Apache-2.0

First architecture deeply integrating a DNA foundation model with an LLM for multimodal biological reasoning, achieving 98% accuracy on KEGG disease pathway prediction and 15%+ average gains on variant effect prediction with interpretable step-by-step reasoning traces (bowang-lab, 390+ stars)

Active3902 months ago
Jupyter Notebook
Apache-2.0

Computational fluid dynamics in JAX, enabling differentiable Navier-Stokes simulations with automatic differentiation for ML-accelerated CFD research, supporting turbulence modeling, convection-diffusion, and complex boundary conditions on CPUs and GPUs (Google Research, 947+ stars)

Active9483 months ago
Jupyter Notebook
Apache-2.0

Teaching Large Language Models the Language of Biology through single-cell transcriptomics (ICML 2024)

Idle8627 months ago
Jupyter Notebook
Apache-2.0

Universal medical image segmentation foundation model trained on 1.57M image-mask pairs across 10 imaging modalities and 30+ cancer types (Nature Communications 2024)

Idle4.3K1 year ago
Jupyter Notebook
Apache-2.0

First system to make novel, verifiable scientific discoveries by pairing LLMs with evolutionary search, solving open problems in combinatorics (cap set problem) and discovering faster matrix multiplication algorithms

Stale1.1K2 years ago
Jupyter Notebook
Apache-2.0