Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

4 of 6,234 resources

Open-source bioimage analysis platform for digital pathology and research, featuring AI-powered cell detection, tissue classification, and whole-slide image analysis with extensible scripting and plugin architecture (1.3K+ stars, actively maintained)

Active1.4K1 week ago
Java
GPL-3.0

Open-source PDF parser for AI-ready data, converting PDFs into Markdown/JSON/HTML/Tagged PDF with layout analysis and reading-order detection; ranks #1 overall on extraction benchmarks with deterministic bounding boxes and hybrid AI mode (26K+ stars, Apache 2.0)

Active26.3K1 week ago
Java
Apache-2.0

Machine learning software for extracting structured metadata from scholarly documents

Active5K2 weeks ago
Java
Apache-2.0

Parse scientific papers to structured fields (title/author/sections/references)

Stale7002 years ago
Java
Apache-2.0