Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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9 of 7,064 resources
A python extension, written in C, for quick access to bigBed files and access to and creation of bigWig files.
Ultra-fast, sensitive search and clustering suite for protein and nucleotide sequence sets.
A Swiss Army knife for genome arithmetic.
BWA-MEM drop-in replacement: 2-3x faster, 2-5x cheaper, 100% identical output on standard CPUs.
lumpy: a general probabilistic framework for structural variant discovery.
Minigraph is a sequence-to-graph mapper and graph constructor. For graph generation, it aligns a query sequence against a sequence graph and incrementally augments an existing graph with long query subsequences diverged from the graph.
Toolkit for processing sequences in FASTA/Q formats.
Standalone C library for assembling Illumina short reads in small regions