Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

6 of 5,923 resources

Ultra-fast, sensitive search and clustering suite for protein and nucleotide sequence sets.

Active2.1K4 days ago
C
MIT

BWA-MEM drop-in replacement: 2-3x faster, 2-5x cheaper, 100% identical output on standard CPUs.

Active223 months ago
C
MIT

lumpy: a general probabilistic framework for structural variant discovery.

Active3423 months ago
C
MIT

A python extension, written in C, for quick access to bigBed files and access to and creation of bigWig files.

Active2444 months ago
C
MIT

Minigraph is a sequence-to-graph mapper and graph constructor. For graph generation, it aligns a query sequence against a sequence graph and incrementally augments an existing graph with long query subsequences diverged from the graph.

Idle48110 months ago
C
MIT

A Swiss Army knife for genome arithmetic.

Idle1K1 year ago
C
MIT