Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
Filters
Health
Domain
Language(1)
License(1)
Source
Type
8 of 6,358 resources
An ultrafast protein aligner for `blastp` and `blastx` like searches.
An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.
A small <720Kb C++ windows utility. That allows you to load Ancestry, 23andMe, FTDNA, or Genes for Good RAW DNA files search them, merge them. covert them to Ancestry format. But also create files from peer reviewed publications to compare with you loaded data to give your genetic disposition for the condition you have entered the data for an statistical risk if OR values are included. Included with the program are example files for Type 2 Diabetes risk factors. (As I have type 2 Diabetes so I could test the results).
A software package for estimating gene and isoform expression levels from RNA-Seq data.
Open-source, platform-independent, community-supported software for describing and comparing microbial communities
VerityMap is a tool for mapping long reads to assemblies of extra-long tandem repeats, producing SAM files and identifying potential heterozygous sites and assembly errors through analysis of rare k-mers. It supports PacBio HiFi and ONT reads and generates interactive HTML plots for variant analysis.
Telseq is a tool for estimating telomere length from whole genome sequence data.