Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

9 of 6,565 resources

A python-based workflow manager.

Active5951 month ago
Python
Apache-2.0

A Workflow Management System geared towards scientific workflows.

Active1.1K1 month ago
Scala
BSD-3-Clause

A small language for defining pipeline stages and linking them together to make pipelines.

Active2422 months ago
Groovy
NOASSERTION

a specification for describing analysis workflows and tools that are portable and scalable across a variety of software and hardware environments, from workstations to cluster, cloud, and high performance computing (HPC) environments.

Idle1.5K7 months ago
Common Workflow Language
Apache-2.0

Workflow library embedded in the Go programming language, focusing on supporting complex workflow constructs, compiling to a single binary, providing powerful file naming and comprehensive audit reports for every output

Stale1.1K2 years ago
Go
MIT

Computation Pipeline library for python widely used in science and bioinformatics.

Stale1755 years ago
Python
MIT

A cross-system scripting language for working with big data pipelines in computer systems of different sizes and capabilities.

Stale925 years ago
Shell

Workflow standard developed by the Broad.

Archived277 years ago
Java
BSD-3-Clause

Hadoop Oozie-based workflow system focused on genomics data analysis in cloud environments.

Stale308 years ago
Java
GPL-3.0