Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

22 of 6,565 resources

A library and command-line tool for building and analyzing complex homogeneous microkinetic models from quantum chemistry calculations, with support for quasi-harmonic thermochemistry, quantum tunnelling corrections, molecular symmetries and more.

Active646 days ago
Python
MIT

Python Library for Automating Molecular Simulation: input preparation, job execution, file management, output processing and building data workflows.

Active932 weeks ago
Python
NOASSERTION

Open source PEM (Proton Exchange Membrane) fuel cell simulation tool.

Active2313 weeks ago
Python
MIT

A package to 'build' collections of materials properties from the output of computational materials calculations.

Active683 weeks ago
Python
NOASSERTION

A Simulation Tool for Fractured and Deformable Porous Media.

Active3151 month ago
Python
GPL-3.0

atomate2 is a library of computational materials science workflows.

Active3291 month ago
Python
NOASSERTION

A quantum chemistry package written in Python.

Active771 month ago
Python
Apache-2.0

Parameter/topology editor and molecular simulator with visualization capability.

Active4531 month ago
Python

A library containing basis sets for use in quantum chemistry calculations. In addition, this library has functionality for manipulation of basis set data.

Active1992 months ago
Python
BSD-3-Clause

Interaction Fingerprints for protein-ligand complexes and more.

Active5102 months ago
Python
Apache-2.0

A tool and library for creating quantum chemistry input files.

Active522 months ago
Python
BSD-3-Clause

Makes alchemical free energy calculations easier by leveraging the full power and flexibility of the PyData stack.

Active2412 months ago
Python
BSD-3-Clause

The "FRamewOrk for Molecular AGgregate Excitations" enables localised QM/QM' excited state calculations in a solid state environment.

Active323 months ago
Python
MIT

File parser/converter for QM, MD and plane-wave DFT programs.

Idle1706 months ago
Python
LGPL-3.0

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

Idle3357 months ago
Python
MIT

A library for computational chemistry (DFT) for input file generation, data extraction, method screening and analysis.

Idle229 months ago
Python
Apache-2.0

A library for estimating thermochemical properties of molecules and adsorbates using group additivity.

Idle91 year ago
Python
MIT

General purpose tools for high-throughput catalysis.

Idle1041 year ago
Python
GPL-3.0

A module for solving and visualizing the Schrödinger equation.

Idle1.2K1 year ago
Python
BSD-3-Clause

Usage-Instructions) - A program to visualize reaction networks.

Stale262 years ago
Python
LGPL-3.0

An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.

Stale2033 years ago
Python
MIT

Open Drug Discovery Toolkit, a modular and comprehensive toolkit for use in cheminformatics, molecular modeling etc.

Stale4673 years ago
Python
BSD-3-Clause