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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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fetchm is a command-line Python tool designed for bacterial comparative genomics. It automates the retrieval, standardization, and integration of genomic metadata (from NCBI Genome) and biological context (from BioSample) records for large-scale comparative studies.
ClarID is a domain-agnostic specification for human-readable, metadata-rich identifiers for subjects and biospecimens. ClarID-Tools is an open-source command-line utility for generating, decoding, and validating these identifiers.