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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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e3SIM is an open-source, agent-based simulator designed to model infectious disease dynamics by explicitly integrating epidemiological, ecological, and evolutionary processes (epi-eco-evo). It allows for realistic simulations of pathogen spread, mutation, and environmental factors in diverse host-pathogen systems.
FRIENDS GUI is an open-source, Python-based tool designed to extract, decode, and visualize 24-hour puffing topography (PT) data collected from a passive vaping monitor (FRIENDS). It assists in evaluating Electronic Nicotine Delivery Systems (ENDS) use and informing regulatory decisions.