Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
Filters
Health
Domain(1)
Language
License
Type
5 of 7,742 resources
MRH is a novel peak detection method that processes raw HRMS data using a hierarchical, multi-resolution decomposition. It enhances peak identification accuracy, particularly at low concentrations, compared to traditional centroiding or grid-based methods.
MicrobeMS is a MATLAB-based desktop application used for analyzing MALDI-ToF mass spectra to identify microbial species. It facilitates comprehensive analysis, including spectrum database compilation and biomarker searching, in a vendor-neutral manner.
DiaReport is an R package designed for computational proteomics, enabling reproducible differential expression (DE) analysis and generating interactive HTML reports from DIA-NN output.
glaDIAtor-nf is a Nextflow workflow for the complete, quantitative data analysis of DIA mass spectrometry proteomics data. It is designed to streamline complex, large-scale analysis pipelines on high-performance computing infrastructure.
DEprot is a comprehensive R-package designed for the end-to-end analysis and visualization of label-free quantitation mass spectrometry data. It provides specialized tools for proteomics data, including a serial imputation strategy for handling non-random missing values.