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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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A tool for integrating DNA methylation effects in transcription factor binding affinity predictions. Implementation of the SEMplMe algorithm to integrate SEMpl with methylation data. A tool for integrating DNA methylation effects in transcription factor binding affinity predictions
A network-based methylome approach to investigate the multivariate nature of health and disease.
Tools and applications for integrative analysis of DNA methylation in social insects.
BiSuflite Bolt (BSBolt) is a fast and scalable bisulfite sequencing processing platform. BSBolt is an integrated analysis platform that offers support for bisulfite sequencing read simulation, alignment, methylation calling, data aggregation, and data imputation. BSBolt has been validated to work with a wide array of bisulfite sequencing data,including whole genome bisulfite sequencing (WGBS), reduced representative bisulfite sequencing data (RRBS), and targeted methylation sequencing data. BSBolt utilizes forked versions of BWA and WGSIM for read alignment and read simulation respectively. BSBolt is released under the MIT license.