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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

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MetaTracer is a nucleotide alignment-based framework that analyzes complex bacterial metatranscriptomic data. It assigns reads to both taxonomic groups and expressed genes in a single pass, preserving species-level resolution.

Active01 month ago
Python
MIT

RdRpCATCH is a unified platform for discovering RNA viruses by scanning metatranscriptomic assemblies. It uses collections of profile Hidden Markov Models (pHMMs) targeting the RdRp enzyme for subsequent taxonomic annotation.