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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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3 of 9,815 resources
LRSomatic is a Nextflow-based pipeline designed for comprehensive somatic variant calling in long-read sequencing data (PacBio HiFi and ONT). It supports SNV, indel, structural variant, and CNV calling, including integration of epigenetic information via Fiber-seq.
TagGen is a high-performance tool designed for long-read sequencing applications, implementing Monte Carlo candidate sampling for barcode generation and an integrated kmer voting/banded edit-distance demultiplexer.
A bioinformatics tool for viewing and calculating base modification frequencies from BAM files