Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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12 of 6,223 resources
Open-source PDF parser for AI-ready data, converting PDFs into Markdown/JSON/HTML/Tagged PDF with layout analysis and reading-order detection; ranks #1 overall on extraction benchmarks with deterministic bounding boxes and hybrid AI mode (26K+ stars, Apache 2.0)
Machine learning software for extracting structured metadata from scholarly documents
Production-grade ETL for transforming complex documents into structured formats, with open-source API
High-accuracy PDF→Markdown/JSON/HTML conversion, specialized for tables/formulas/code blocks with benchmark scripts
Diffusion-based document OCR framework replacing autoregressive decoding with block-level parallel diffusion decoding, enabling high-accuracy text recognition in scientific PDFs (613+ stars, MIT License)
Advanced OCR with PP-StructureV3 document parsing, 13% accuracy improvement, supports 80+ languages
SOTA multimodal document parsing with 1.2B parameters outperforming GPT-4o, converts PDFs to LLM-ready Markdown/JSON
Toolkit for linearizing academic PDFs into LLM-ready text with high accuracy and structure preservation, optimized for scientific literature extraction
Neural optical understanding for academic documents, transforms scientific PDFs to Markdown with mathematical formula support
Comprehensive toolkit for high-quality PDF content extraction with layout detection, formula recognition, and OCR
Parse scientific papers to structured fields (title/author/sections/references)
Large-scale PDF/LaTeX/JATS parsing to standardized JSON for millions of papers