Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

8 of 6,223 resources

High-accuracy PDF→Markdown/JSON/HTML conversion, specialized for tables/formulas/code blocks with benchmark scripts

Active36.4K2 weeks ago
Python
GPL-3.0

Diffusion-based document OCR framework replacing autoregressive decoding with block-level parallel diffusion decoding, enabling high-accuracy text recognition in scientific PDFs (613+ stars, MIT License)

Active6133 weeks ago
Python
MIT

Advanced OCR with PP-StructureV3 document parsing, 13% accuracy improvement, supports 80+ languages

Active81.3K1 month ago
Python
Apache-2.0

SOTA multimodal document parsing with 1.2B parameters outperforming GPT-4o, converts PDFs to LLM-ready Markdown/JSON

Active65.9K1 month ago
Python
NOASSERTION

Toolkit for linearizing academic PDFs into LLM-ready text with high accuracy and structure preservation, optimized for scientific literature extraction

Active17.4K3 months ago
Python
Apache-2.0

Neural optical understanding for academic documents, transforms scientific PDFs to Markdown with mathematical formula support

Idle10K1 year ago
Python
MIT

Comprehensive toolkit for high-quality PDF content extraction with layout detection, formula recognition, and OCR

Idle9.8K1 year ago
Python
AGPL-3.0

Large-scale PDF/LaTeX/JATS parsing to standardized JSON for millions of papers

Stale4692 years ago
Python
Apache-2.0