Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

5 of 6,565 resources

Arc Institute's 40B-parameter genome foundation model trained on 9 trillion nucleotides from all domains of life, supporting 1M base pair context for generalist DNA/RNA/protein prediction and design (Nature 2026)

Active4.1K2 months ago
Jupyter Notebook
Apache-2.0

Gene expression prediction

Active15.1K2 months ago
Jupyter Notebook
Apache-2.0

First architecture deeply integrating a DNA foundation model with an LLM for multimodal biological reasoning, achieving 98% accuracy on KEGG disease pathway prediction and 15%+ average gains on variant effect prediction with interpretable step-by-step reasoning traces (bowang-lab, 390+ stars)

Active4022 months ago
Jupyter Notebook
Apache-2.0

100M-parameter foundation model pretrained on 50M+ human single-cell transcriptomes covering ~20,000 genes, achieving SOTA on gene expression enhancement, drug response and perturbation prediction (Nature Methods 2024)

Idle4229 months ago
Jupyter Notebook
Apache-2.0

Teaching Large Language Models the Language of Biology through single-cell transcriptomics (ICML 2024)

Idle8729 months ago
Jupyter Notebook
Apache-2.0