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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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4 of 6,750 resources
BacSelect is a reproducible resource for selecting compact, nested panels of complete bacterial genome assemblies that span genome architecture. From a defined and versioned public genome universe, BacSelect deterministically selects assemblies so users can choose a panel size from N=10–500 while retaining nestedness across scales. Versioned releases provide genome-panel manifests, downloadable assemblies, structural-coverage information, checksums and provenance for reproducible benchmarking, method development and comparative genomics.
GAIn is a platform for annotating genetic variants, genomic positions, and regions with reproducible, declarative pipelines using curated Genomic Resource Repositories.
blue-crab is a tool to convert from ONT POD5 format to the community maintained SLOW5/BLOW5 format. Lossless nanopore pod5 s/blow5 file conversion.