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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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Enzymm is a tool designed to detect catalytic features (motifs) in predicted protein structures by performing geometric matching of known enzyme catalytic sites. It provides insights into enzyme function and mechanism, especially for distantly related or convergent enzymes.
QuantumPDB is a Python package and workflow that automates the generation of QM cluster models from raw protein structures, enabling high-throughput computational studies of enzyme catalysis.