Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

4 of 6,573 resources

Multimodal AI system generating virtual populations for tumor microenvironment modeling from H&E and multiplex immunofluorescence pathology images, enabling large-scale spatial analysis of cancer biology and therapeutic response prediction (Microsoft Research & Providence, 370+ stars)

Active4022 weeks ago
Jupyter Notebook
Apache-2.0

Whole-slide pathology foundation model trained on 1.3 billion image tiles from 171K slides using a LongNet-based architecture to encode gigapixel-scale WSIs for cancer subtyping and biomarker prediction (Microsoft Research & Providence, 601+ stars)

Active6261 month ago
Python
Apache-2.0

Autonomous AI agent for end-to-end spatial proteomics analysis, featuring SP-Bench for agentic multiplexed-imaging workflows (tomtommyyuan, 140+ stars, 2026)

Active1441 month ago
Python
Apache-2.0

First large vision-language assistant for gigapixel whole-slide pathology image understanding, released with the SlideInstruction dataset and SlideBench benchmark (uni-medical, Apache 2.0, 2025)

Active1264 months ago
Python
Apache-2.0