Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

5 of 6,223 resources

This tutorial involves the use of a multilayer AutoEncoder (AE) for feature extraction and pattern recognition by analyzing Molecular Dynamic Simulations, step by step, using the BioExcel Building Blocks library (biobb)

Active03 months ago
Python
Apache-2.0

This tutorial aims to illustrate the process of analyzing a membrane molecular dynamics (MD) simulation, step by step, using the BioExcel Building Blocks (biobb)

Active14 months ago
Python
Apache-2.0

This tutorial aims to illustrate the process of checking a molecular structure before using it as an input for a Molecular Dynamics simulation, step by step, using the BioExcel Building Blocks (biobb).

Active04 months ago
Python
Apache-2.0

This tutorial aims to illustrate the process of generating protein conformational ensembles from 3D structures using Coarse-Grained tools from the FlexServ server and analysing its molecular flexibility

Active34 months ago
Python
Apache-2.0

This tutorial aims to illustrate the process of computing classical molecular interaction potentials from protein structures step by step, using the BioExcel Building Blocks library (biobb)

Active14 months ago
Python
Apache-2.0