Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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27 of 5,893 resources
Democratizing AI scientists by transforming any LLM into research systems with 600+ scientific tools (Harvard MIMS)
Robust, lightweight infrastructure for multi-agent autonomous self-evolution, built for autoresearch; agents run in isolated git worktrees, share knowledge through a common state directory, and are scored by a grader daemon; natively integrated with Claude Code, Codex, Cursor Agent, OpenCode, and Kiro (672+ stars, Apache 2.0)
Self-evolving AI scientist with 6 specialized sub-agents (plan/research/code/debug/analyze/write) and persistent memory, #1 on DeepResearch Bench II and AstaBench, supporting multi-provider LLMs and multi-channel deployment (Apache 2.0, 2026)
Self-evolving AI research colleague built on OpenClaw with 285+ runtime-adaptive skills across 28+ disciplines, persistent cross-session research memory, and zero-hallucination citation protocols; agent autonomously writes new SKILL.md files based on research patterns without redeployment (828+ stars, MIT License, 2026)
First fully customizable open-source multiagent framework automating complete research lifecycle from idea conception to LaTeX papers with dynamic workflows
Closed-loop multi-agent system from hypothesis to verification across 12 scientific tasks, #1 on MLE-Bench (36.44%)
LLM-driven machine learning engineering agent using agentic tree search to autonomously draft, debug and benchmark ML code; wins 4× more medals than the best linear agent on OpenAI's MLE-Bench (75 Kaggle competitions) (1.3K+ stars, MIT License)
FutureHouse's end-to-end scientific discovery multi-agent system orchestrating literature search (Crow/Falcon) and data analysis (Finch) agents, first AI-generated drug discovery identifying ripasudil as novel dry AMD therapeutic (2025)
End-to-end semi-automated scientific discovery system that designs, iterates, and analyzes code-based experiments via LLM-as-a-mutator over scientific articles and code examples; auto-creates, runs, and debugs experiment code in containers and writes meta-analysis reports (339+ stars, Apache 2.0)
Skill operating layer for biomedical AI agents with 211 production-ready SKILL.md files across 7 domains (biology, pharmacology, medicine, data science, literature search), enabling modular dry-lab reasoning and protocol composition for Stanford LabOS-compatible agents
Open-source implementation of AlphaEvolve's evolutionary coding agent paradigm, enabling LLMs to autonomously discover and optimize algorithms through iterative evolution, matching the approach behind DeepMind's breakthrough matrix multiplication discovery (6.2K+ stars, 2025)
AI-human collaborative research platform where a human researcher works with a team of LLM agents via team and individual meetings to perform scientific research; demonstrated by designing new SARS-CoV-2 nanobodies with wet-lab validation
Automated and rigorous experiments using AI agents for scientific discovery
Automated hypothesis testing with agentic sequential falsifications
First system to make novel, verifiable scientific discoveries by pairing LLMs with evolutionary search, solving open problems in combinatorics (cap set problem) and discovering faster matrix multiplication algorithms
First system progressively surpassing human SOTA on frontier AI tasks (183.7%, 1.9%, 7.9% improvements), month-long autonomous discovery with 20,000+ GPU hours
Extended autonomy AI scientist with 200 parallel agent rollouts, 42K lines of code execution, 1.5K papers analyzed per run, achieving 79.4% accuracy and 7 scientific discoveries (Edison Scientific)
Autonomous algorithm discovery combining evolutionary search with peer-review reward models, achieving best-known performance on circle packing problems
Fully autonomous research from idea to paper with multi-agent debate, citation verification, and OpenClaw integration (11K+ stars, 2026)
Autonomous pipeline from literature review→hypothesis→algorithm implementation→publication-level writing with Scientist-Bench evaluation
Language agent gymnasium for challenging scientific tasks including DNA manipulation, literature search, and protein engineering
Andrej Karpathy's autonomous LLM research framework: AI agent runs overnight experiments on a real training setup, auto-editing code→5min training→evaluation in a loop, ~100 experiments per night on a single GPU
Universal scientific research intelligence covering 50+ disciplines, repositioning LLMs as cross-disciplinary generators with human experts as verifiers; 30B model outperforms Claude Opus and GPT on 5 research benchmarks
Evolvable and privacy-preserving multi-agent framework automating, scaling, and accelerating data sciences with a particular focus on end-to-end single-cell biology analyses; features agentic code evolution, multi-agent team orchestration, distributed architecture, and a community marketplace with 1,000+ curated agents and skills (428+ stars)
Open-source platform for building, extending, and experimenting with scientific agents, providing modular agent construction tools and standardized evaluation pipelines for accelerating autonomous scientific discovery research (748+ stars, MIT License)
First fully autonomous open-ended scientific discovery system with official implementation: hypothesis→experiment→writing→review simulation (13.8K+ stars, 2024)
Decentralized self-organizing teams of AI agents for long-running computational scientific experimentation; agents critique each other's proposals before spending compute and share successes/failures to avoid redundant exploration, achieving +8.33% on BioML-Bench, 1.9× faster nanoGPT optimization, and +12.5% on ProteinGym ACE2-Spike (425+ stars, 2026)